NeuroDataScience - ORIGAMI lab: We are a research group at the Montreal Neurological Institute. Our aim is to produce and promote open and reproducible neuroimaging research, with a focus on neuroimaging data science and neuroinformatics. We develop methods and tools to best analyse neuroimaging and genetics data, and strive to produce and foster more reproducible and replicable science in our field, and more generally in the life sciences.

Our lab! Our lab (with duck)

News

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Research

Canonical Correlation Analysis of brain and behaviour

Effects of sample size/composition and analysis pipeline
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Quantifying the Dynamics of Task-based Functional Connectivity (Task-dFC)

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Assessing the reliability of dynamic Functional Connectivity (dFC) measurement through a comprehensive validation framework

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Normative modelling for predicting neuropsychiatric symptoms in Parkinson's Disease

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A simulation-based approach for evaluating replicability of Parkinson's disease neuroimaging biomarkers

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Nipoppy: A framework for the reproducible organization and processing neuroimaging-clinical datasets

A Neurobagel complement project
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Neurobagel

Neuro(imaging) metadata integration and search
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Is between-pipeline variability affected by image quality?

A subcortical segmentation study
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Facilitating neuroimaging meta-research

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Incorporating Large Language Models (LLMs) into Modern Neuroscience

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Benchmarking federated learning approaches against siloed and mega-analysis regimes

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(Poppy+Bagel) x ENIGMA-PD

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Analytic Flexibility of dMRI Preprocessing and free-water corrected DTI (fwDTI) in Parkinson's Disease (PD)

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Continuous testing of neuroimaging results across pipelines and datasets

Application to hearing loss associations with brain structure
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People

Faculty

Jean-Baptiste Poline
Principal Investigator

Researchers

Brent McPherson
Postdoctoral researcher
Nikhil Bhagwat
Academic Associate
Julia-Katharina Pfarr
Postdoctoral Scholar
Kendra Oudyk
Kendra Oudyk
Postdoctoral researcher

Staff

Sebastian Urchs
Research Software Developer
Alyssa Dai
Research Software Developer
Arman Jahanpour
Research Software Developer

Graduate Students

Michelle Wang
PhD student
Alice Chen A
Alice Chen
PhD rotation student

Close Collaborators

Remi Gau Close Collaborator
Yaroslav Halchenko Close Collaborator
Chris Markiewicz Close Collaborator

Undergraduate Students

Kini Chen Undergraduate Researcher

Alumni

Ting Zhang PhD student
Gaël Varoquaux Visiting Professor (Research Director, Inria)
Alexandre Hutton Research Assistant
Adam Trefonides Research Software Developer
Peer Herholz Postdoctoral researcher
Qing Wang (Vincent) Postdoctoral researcher
Elizabeth DuPre PhD student
Alexandre Pérez Research Trainee
Inés Gonzalez Pepe Research Assistant
Jonathan Armoza Research Software Developer
Kate Kim Undergraduate Researcher
Lukas Shannon Undergraduate Researcher
Jérôme Dockès Postdoctoral researcher